CDS

Accession Number TCMCG006C44340
gbkey CDS
Protein Id XP_013739188.1
Location join(9912976..9913020,9913096..9913217,9913310..9913369,9913447..9913566,9913647..9913766,9914017..9914329,9914427..9914585,9914669..9914775,9914880..9914970,9915073..9915214,9915334..9915490,9915656..9915772,9915889..9916273)
Gene LOC106441989
GeneID 106441989
Organism Brassica napus

Protein

Length 645aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013883734.2
Definition uncharacterized protein LOC106441989 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category S
Description Rhamnogalacturonate lyase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K18195        [VIEW IN KEGG]
EC 4.2.2.23        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGTCGGACCAAAGTTCTGTTCACTTGGATGTCAAAGACAACCATGTGGTTATGAAAAATGGTATAGTCGAAGTGACCATATCAAAACCAGATGGTTTTGTCACTGGAATCTCTTACCATGGTGTCAACAATCTACTAGAAAGTCATAATGAAGACTATGATCGAGGTTACTGGGACCTTGTTTGGAGCGAGTATGGAACGCCTGGAACCACAGGAAACTCCGAGCGGATCAAAGGCACAAGTTTTGAAGTAGTAGTGGAAAATGAGGAACTGGTAGAGATATCCTTCACAAGAAAATGGGATTCTTCTCTCCAAGATCATATTGCTCCCATTAATGTCGACAAGAGGTTCATAATGCGTAAAGATGTTACTGGATTCTACTCATACGGAATATTCGAGCATCTAGCTGAATGGCCAGCTTTTAACTTGCCTCAGACAAGGATTGTTTACAAGCTTCGTAAAGACAAGTTTCGATACATGGCAGTTGCTGATAACAGGCAGAGAAAAATGCCGCTTCCAGAAGATAGATTGGGTAAAAGAGGAAGACCATTGGCTTATCCTGAAGCTGTTCTTCTTGTTCATCCTGTTGAAGAAGAGTTCAAAGGAGAGGTTGATGACAAGTATGAGTATTCATGTGAGAACAAAGATCTTAAAGTGCATGGGTGGATCTCGCATAACCTTGATTTGGGTTGCTGGCAAATCATTCCTAGCAATGAGTTTAGATCAGGTGGCTTGGTGAAACAGAACCTTACTTCTCATGTTGGTCCAATCAGTCTCGCTATGTTTATAAGTGCTCATTATGCGGGTGAGGACATGGTGATGAAGGTAAAAGCAGGGGAGTCATGGAAGAAAGTGTTTGGTCCTGTTTTTACTTACCTTAATTGTTTGCCTGACCAAACCTCTGATCCTCTTTCACTATGGCAAGACGCTAAAAGCCAGATGTTAATTGAAGTCCAAAGCTGGCCTTACGGTTTCCCCGCTTCAGAAGACTATGCATTGTCTGATAAGCGTGGTTGCATCAATGGTAGATTACTAGTACGAGACAAGTCCCTTAGTGATGAACTTTTACCAGCGAATGGTGCTTTCATAGGTTTGGCTCCACCAGGAGAGGTTGGATCTTGGCAAACAGAATCTAAAGGATATCAGTTCTGGACAGAAGCAGATGCAGATGGTTATTTCACCATAAATAATATCCGAGAAGGTGAATATAATCTCAATGCTTATGTGACAGGATGGATTGGAGACTATCAATACGAAGAACTGATTACCATCACTGCAGGCTGCGACATTGACATTAGCAGTATCGTGTATGAACCGCCACGAGATGGGCCAACGGTGTGGGAAATAGGAATCCCTGACCGGTCGGCAGCTGAGTTCTTTGTTCCAGACCCAAATCCCAAATACATCAATAAGCTATATATTGGTCATCCTGACAGGTTTAGGCAATATGGGCTATGGGAAAGATACACAGAACTATATCCTAAGGAAGATTTGGTGTTCACCATTGGCGTTAGTGATTACAAAAAAGATTGGTTCTTTGCACACGTTACCAGGAAAACAGGAGATGATACTTATGAAAAGACGACGTGGCAAATAAAATTCAAGCTCGAGAAGGTGCAGGAAAACAGCACATACAAACTTAGGATCGCACTAGCAACCGCAAATGTAGCGGAATTACAGGTGAGGATGAACGAAGATGAGAGTGAAAAGAGTTTGATTTTCACAACTGGTGTAATAGGACACGACAACACGATCGCAAGACATGGGATACATGGACTCTATAGACTTTATAATGTGGATGTACCGAGTGAGAAGTTTGTCGAAGGAGACAACACTTTGTTCTTGACACAAGCGATGACTACCGTTGGAGCTTTTAATGGTCTTATGTATGACTATATCCGCCTTGAAGAGCCTTGTTTAGATTCGAACATTCGCTAA
Protein:  
MSDQSSVHLDVKDNHVVMKNGIVEVTISKPDGFVTGISYHGVNNLLESHNEDYDRGYWDLVWSEYGTPGTTGNSERIKGTSFEVVVENEELVEISFTRKWDSSLQDHIAPINVDKRFIMRKDVTGFYSYGIFEHLAEWPAFNLPQTRIVYKLRKDKFRYMAVADNRQRKMPLPEDRLGKRGRPLAYPEAVLLVHPVEEEFKGEVDDKYEYSCENKDLKVHGWISHNLDLGCWQIIPSNEFRSGGLVKQNLTSHVGPISLAMFISAHYAGEDMVMKVKAGESWKKVFGPVFTYLNCLPDQTSDPLSLWQDAKSQMLIEVQSWPYGFPASEDYALSDKRGCINGRLLVRDKSLSDELLPANGAFIGLAPPGEVGSWQTESKGYQFWTEADADGYFTINNIREGEYNLNAYVTGWIGDYQYEELITITAGCDIDISSIVYEPPRDGPTVWEIGIPDRSAAEFFVPDPNPKYINKLYIGHPDRFRQYGLWERYTELYPKEDLVFTIGVSDYKKDWFFAHVTRKTGDDTYEKTTWQIKFKLEKVQENSTYKLRIALATANVAELQVRMNEDESEKSLIFTTGVIGHDNTIARHGIHGLYRLYNVDVPSEKFVEGDNTLFLTQAMTTVGAFNGLMYDYIRLEEPCLDSNIR